The Briggs Lab:

Chytrid fungus/Mountain Yellow-Legged Frog Project

 

 

Introduction
The mountain yellow-legged frog, Rana muscosa, was previously abundant in lakes throughout the Sierras. In the last several decades its populations have become fragmented due to the introduction of non-native trout, which prey on frog eggs and tadpoles. The previously abundant frog populations are now dwindling. In the last several years, a newly identified fungal pathogen, Batrachochytrium dendrobatidis (B.d. for short), which causes the disease chytridiomycosis, has been causing die-offs and local extinctions of R. muscosa, and has been affecting amphibians worldwide
 
See www.mylfrog.com for more details about Rana muscosa declines.
See www.amphibiaweb.org for more information on amphibian declines, and amphibians in general.  

Links for information on amphibian chytridiomycosis:
http://amphibiaweb.org/chytrid/index.html
http://www.jcu.edu.au/school/phtm/PHTM/frogs/batrachochytrium.htm
http://lifesciences.asu.edu/irceb/amphibians/

B.d. Detection Methods:
We use a non-invasive swabbing technique to detect B.d. in the field. 
Our protocol, and a video illustrating this technique are available on AmphibiaWeb. 
We use the real-time (quantitative) PCR protocol outlined in the following reference to analyze the samples for B.d.:
Boyle, D.G., Boyle, D.B., Olsen, V., Morgan, J.A.T., Hyatt, A.D. 2004. Rapid quantitative detection of chytridiomycosis (Batrachochytrium dendrobatidis) in amphibian samples using real-time Taqman PCR assay. Diseases of Aquatic Organisms  60(2): 141-148.

 

Research
We are studying the impacts of Batrachochytrium dendrobatidis (B.d.) on mountain yellow-legged frogs in the California Sierra Nevada. 

This includes field surveys, which have shown that B.d. is associated with extinction of R. muscosa from hundreds of lakes in the Sierra, especially in the Sequoia and Kings Canyon National Parks. In these lakes, previously large frog populations are driven extinct within a few years of the first appearance of B.d.  However, in
Yosemite National Park and other northern areas, small populations of R. muscosa are apparently persisting with B.d.  Mark-recapture studies have shown that individuals in these populations have low-level infections, but can survive between years with the disease.  We are investigating the factors that might be contributing to these different population-level outcomes.  We are performing laboratory and field experiments to quantify the disease transmission dynamics, and to determine the factors that affect the impact of disease on individuals and populations. We are developing spatially-explicit models of the B.d./R. muscosa interaction. This includes using population genetics to quantify the scale of movement of the frogs and fungus.

People
PI: Cherie Briggs, Population modeling
co-PI’s: Roland Knapp, Frog ecology and surveys
            Craig Moritz, Frog population genetics
            John Taylor, Chytrid biology and genetics

Postdoctoral Researchers:
Vance Vredenburg, Frog dispersal, behavior and ecology
Erica Bree Rosenblum
Jess Morgan, now at
Department of Primary Industries and Fisheries
Martha Hoopes, now Assistant Professor, Mount Holyoke College

Graduate Students:
John Parker, Amphibian pathology
Mary Stice, Frog immunology
Tate Tunstall, B.d. community impacts and/or genetics
Rob Bingham, Frog population genetics
Lara Rachowicz, PhD graduated, now at the National Park Service, Yosemite National Park

Research Assistants:
Eleanore Sternberg
Tina Cheung
Tom Smith

Undergraduate Researchers:
Many undergraduates have helped us with this project over the years, including:
Alicia Bihler, Becky Chong, Brianna Gaard,  Kevin Gin, Ardeshir Jahanian, Yvonne Lee, Erika Gisella Lin, Meile Liu, Shelly Lyser, Kim Nguyen, Rosa Schneider, and Johnny Yu

 



Publications
Rachowicz, L.J., R.A. Knapp, J.A.T. Morgan, M.J. Stice, V.T. Vredenburg, J.M. Parker and C.J. Briggs. In press. Emerging infectious disease as a proximate cause of amphibian mass mortality in Rana muscosa populations. Ecology.

 

Rollins-Smith, L.A., D.C. Woodhams, L..K. Reinert, V.T. Vredenburg, C.J. Briggs, P.F. Nielsen, and J.M. Conlon. In press.  Antimicrobial Peptide Defenses of the Mountain Yellow-Legged Frog (Rana muscosa). Developmental & Comparative Immunology.

 

Knapp, R.A. and J.A.T. Morgan. In press. Tadpole mouthpart depigmentation as an accurate indicator of chytridiomycosis, an emerging disease of amphibians. Copeia.

 

Briggs, C.J, Vredenburg, V.T., Knapp, R.A., and L. J. Rachowicz. 2005. Investigating the population-level effects of chytridiomycosis, an emerging infectious disease of amphibians. Ecology, 86:3149–3159.

 

Rachowicz, L.J, J.M. Hero, J.A.T. Morgan, V.T. Vredenburg, J. Taylor, C.J. Briggs. 2005. The novel and endemic pathogen hypothesis: explanations for the origin of an emerging infectious disease of wildlife. Conservation Biology, 19(5):1441-1448.

 

Rachowicz, L.J. and V.T. Vredenburg. 2004. Transmission of Batrachochytrium dendrobatidis within and between amphibian life stages. Diseases of Aquatic Organisms 61:75-83.

 

Vredenburg, V.T. 2004. Reversing introduced species effects: Experimental removal of introduced fish leads to rapid recovery of declining frog. Proceedings of the National Academy of Sciences 101(20):7646-7650.

In review:
Rachowicz, L.J. and C. J. Briggs. In review. Quantifying the disease transmission function: Effects of density on Batrachochytrium dendrobatidis transmission in the mountain yellow-legged frog (Rana muscosa). Ecology.


Davidson, C., and R. A. Knapp.  In prep. A tale of two stressors: pesticides, fish, and the decline of the mountain yellow-legged frog. Proceedings of the National Academy of Sciences.

Funding
This research was funded by:
NIH/NSF Ecology of Infectious Disease Program grant
(funded by National Institute of Environmental Health Sciences). 
R01 ES12067, “Amphibian Disease Dynamics in a Fragmented Landscape”, $2,250,000, 2002-2007.

Additional funding for portions of the research was provided by:
UC Davis, Exotic/Invasive Pests and Diseases Research Program
UC Water Resources Center
California Department of Fish and
Game
National Park
Service